Marc C. Deller, D.Phil.
marcdeller.com eloratherapeutics.com marc@marcdeller.com GitHub DOI 10.5281/zenodo.21807353 
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PETase ANnotation and Triage System

Nature's solution to a human-made problem, and structural learnings from Nature

PANTS-90e52a1f6d3f

Marine plastisphere 217 aa · assembly ERZ21854033_FASTA_predicted_cds · contig ERZ21854033.13667-NODE-13667-length-1925-cov-4.954011_3

Retrieval

E-value1.90e-08
Bitscore21.4
Identity to nearest0.257
Nearest characterisedEC:A0ABP6CMB2

Structure

Methodesmfold
Mean pLDDT94.5
RMSD to IsPETase16.51 Å
Aligned fraction0.170

Aligned fraction is a length-normalised gemmi superposition statistic, not a true TM-score.

Active site

TriadS108/D157/H190
Ser–His3.18 Å
His–Asp3.16 Å
Cleft width18.84 Å
Cleft depth3.87 Å

Aromatic clamp: PHE107, PHE109, PHE127, PHE139, PHE191, PHE192, PHE37, PHE63, PHE65, TRP112, TYR137, TYR75

Structure, superposed on IsPETase

Catalytic triad drawn as ball-and-stick from the measured residues.

Sequence

MPEVIFPGPEGRLEGRYHPQKERDAPIAIVLHPHPQFGGTMNHKVVHALHYAFFNMGFTVLRFNFRGVGRSQGEYDQGIGELSDAASALDYLQSMNNNSKHCWVAGFSFGAWIGMQLLMRRPEITGFISVSPPANMYDFSFLAPCPSSGLIINGTADRVAPPADTESLVSKLHDQKGITITHTQVEGAGHFFEDPHLDTLIGHTTDYVKRRLTETTR