Marc C. Deller, D.Phil.
marcdeller.com eloratherapeutics.com marc@marcdeller.com GitHub DOI 10.5281/zenodo.21807353 
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PETase ANnotation and Triage System

Nature's solution to a human-made problem, and structural learnings from Nature

PANTS-c5db9ee6498b

Human gut 274 aa · assembly ERZ4561292_FASTA_predicted_cds · contig ERZ4561292.100278-Hadza-MoBio-hadza-A-D-D-16-1621--NODE-100278-length-2449-cov-2.185076_1

Retrieval

E-value2.30e-20
Bitscore60.6
Identity to nearest0.340
Nearest characterisedPLC:A0A163MA58

Structure

Methodesmfold
Mean pLDDT86.6
RMSD to IsPETase5.80 Å
Aligned fraction0.219

Aligned fraction is a length-normalised gemmi superposition statistic, not a true TM-score.

Active site

TriadSNone/DNone/HNone
Ser–HisNone Å
His–AspNone Å
Cleft widthNone Å
Cleft depthNone Å

Aromatic clamp:

Structure, superposed on IsPETase

Catalytic triad drawn as ball-and-stick from the measured residues.

Sequence

PDDYTKTVKIGGLIEQAYLFDGPHRIARQSMAAPKPMEQYEIYYPADLAETAARYPAVIVVNGSGTPAKRYPALFQHLASWGFIVIGNEDPSTGTGQSADRTASKLLELNEAPDSQFYHRIDIAHIGITGHSQGGAGVFNAITSQPHHALYRTAVALSPTNERVAEALHWTYDPKAVAIPIFLLAGAQGDFELKIVLPKEDMQSMYAKIPAPKAMARRKGAEHGQMLYTADGYVTAWFCWHLQGDSTAAKVFSGNSPELLQNRCYQDVKLDGFD